Thomas Cavalier-Smith
From Palaeos
Contents |
[edit] Biography
Professor Thomas (Tom) Cavalier-Smith, (born October 21, 1942), FRS, FRSC, NERC Professorial Fellow, is a Professor of Evolutionary Biology in the Department of Zoology, at the University of Oxford. He was presented with the International Prize for Biology (a prize of 10 million yen) in 2004 [ref http://www.jsps.go.jp/english/e-biol/20awards.html].
Cavalier-Smith has published extensively on the classification of protists. One of his major contributions to biology was his proposal of a sixth kingdom of life: the Chromista, although the evidence for the existence of the group is still open to debate. He also proposed that all chromista and alveolata share the same common ancestor, a claim later borne out by studies of morphological and molecular evidence by other labs. He named this new group the Chromalveolates. Prof. Cavalier-Smith has also published prodigiously on issues such as the origin of various cellular organelles (including the nucleus, mitochondria), genome size evolution, and endosymbiosis. Though fairly well known, many of his strongest claims have been controversial and have not gained widespread acceptance in the scientific community to date.
[edit] Taxa
- (The following list of new taxa named or old taxa reinterpreted by is (apart from some details under "original classification") taken verbatum from The Taxonomicon's page on Reference: Cavalier-Smith, 1998. The citation is to: Cavalier-Smith, T. 1998. a revised six-kingdom system of life. Biol. Rev. 73: 203-266.)
[edit] Original Classification
[edit] New group
- Subkingdom Eomycota subking. nov.
- Subkingdom Mesozoa subking. nov.
- Subkingdom Neomycota subking. nov.
- Subkingdom Unibacteria new subkingdom
- Infrakingdom Discicristata infraking. nov.
- Infrakingdom Ecdysozoa infrak. nov.
- Infrakingdom Glaucophyta infraking. nov.
- Infrakingdom Glycobacteria infrak. nov.
- Infrakingdom Lipobacteria infrak. nov.
- Infrakingdom Lophozoa infrak. nov.
- Infrakingdom Placozoa infrak. nov.
- Infrakingdom Platyzoa infraking. nov.
- Infrakingdom Rhodophyta infraking. nov.
- Superphylum Conchozoa superphyl. nov.
- Superphylum Gyrista superphyl. nov.
- Superphylum Haemopoda superp. nov.
- Superphylum Nemathelminthes superphyl. nov.
- Superphylum Planctobacteria superphyl. nov.
- Superphylum Sagenista superphyl. nov.
- Superphylum Sipuncula superphyl. nov.
- Superphylum Vermizoa superphyl. nov.
- Phylum Acanthognatha phyl. nov.
- Phylum Archemycota phyl. nov.
- Phylum Bigyra phyl. nov.
- Phylum Brachiozoa phyl. nov.
- Phylum Cercozoa phyl. nov.
- Phylum Eurybacteria phyl. nov.
- Phylum Lobopoda phyl. nov.
- Phylum Tracheophyta phyl. nov.
- Subphylum Bigyromonada subphyl. nov.
- Subphylum Chlorobibacteria subphyl. nov.
- Subphylum Chlorophytina subphyl. nov.
- Subphylum Conosa subphyl. nov.
- Subphylum Dictyomycotina subphyl. nov.
- Subphylum Euspirochaetae subphyl. nov.
- Subphylum Fibrobacteria subphyl. nov.
- Subphylum Fusobacteria subphyl. nov.
- Subphylum Gloeobacteria subphyl. nov.
- Subphylum Leptospirae subphyl. nov.
- Subphylum Macrorhodophytina subphyl. nov.
- Subphylum Manubrispora subphyl. nov.
- Subphylum Melanomycotina subphyl. nov.
- Subphylum Monokonta subphyl. nov.
- Subphylum Orthomycotina subphyl. nov.
- Subphylum Phragmophytina subphyl. nov.
- Subphylum Phycobacteria subphyl. nov.
- Subphylum Plicostoma subphyl. nov.
- Subphylum Rhodellophytina subphyl. nov.
- Subphylum Saccostoma subphyl. nov.
- Subphylum Scalidorhyncha subphyl. nov.
- Subphylum Septomycotina subphyl. nov.
- Subphylum Teichobacteria subphyl. nov.
- Subphylum Thiobacteria subphyl. nov.
- Subphylum Trochata subphyl. nov.
- Infraphylum Allomycotina infraphy. nov.
- Infraphylum Bryatae infraphyl. nov.
- Infraphylum Chromatibacteria infraphyl. nov.
- Infraphylum Endobacteria infraphyl. nov.
- Infraphylum Eurytherma infraphy. nov.
- Infraphylum Mucorhabda infraphyl. nov.
- Infraphylum Operculata infraphyl. nov.
- Infraphylum Pharyngata infraphyl. nov.
- Infraphylum Prasinophytae infraphyl. nov.
- Infraphylum Priapozoa infraphyl. nov.
- Infraphylum Psilophytae infraphl. nov.
- Infraphylum Rudophytae infraphyl. nov.
- Infraphylum Spiculata infraphyl. nov.
- Infraphylum Tetraphytae infraphyl. nov.
- Infraphylum Zygomycotina infraphyl. nov.
- Superclass Eozygomycetia supercl. nov.
- Superclass Neozygomycetia supercl. nov.
- Class Allomycetes cl. nov.
- Class Blastocystea cl. nov.
- Class Bolomycetes cl. nov.
- Class Endomycetes cl. nov.
- Class Enteromycetes cl. nov.
- Class Eophyceae cl. nov.
- Class Gelimycetes cl. nov.
- Class Geomycetes cl. nov.
- Class Glomomycetes cl. nov.
- Class Loculomycetes cl. nov.
- Class Postgaardea cl. nov.
- Class Rhodellophyceae cl. nov.
- Class Septomycetes cl. nov.
- Class Taphrinomycetes cl. nov.
- Class Zoomycetes cl. nov.
- Class Zygomycetes cl. nov.
- Subclass Calycomycetidae subcl. nov.
- Subclass Chaetophycidae cl. nov. [sic]
- Subclass Dacrymycetidae subcl. nov.
- Subclass Dendromycetidae subcl. nov.
- Subclass Dipomycetidae subcl. nov.
- Subclass Entomycetidae subcl. nov.
- Subclass Lecomycetidae subcl. nov.
- Subclass Meromycetidae subcl. nov.
- Subclass Ostiomycetidae subcl. nov.
- Subclass Pedomycetidae subcl. nov.
- Subclass Pezomycetidae subcl. nov.
- Subclass Rumpomycetidae subcl. nov.
- Subclass Spizomycetidae subcl. nov.
- Subclass Stichophycidae subcl. nov.
- Subclass Verrucomycetidae subcl. nov.
- Superorder Pyxomycetalia superord. nov.
- Superorder Trichomycetalia superord. nov.
- Order Basidiobolales ord. nov.
- Order Coelomomycetales ord. nov.
- Order Geosiphonales ord. nov.
- Order Mesostigmatales ord. nov.
- Order Mortierellales ord. nov.
- Order Pirsoniales ord. nov.
- Family Pirsoniaceae fam. nov.
[edit] New rank
- Infrakingdom Archaebacteria Woese]] & Fox, 1977 stat. nov.
- Infrakingdom Chaetognathi Leuckart, 1854 stat. nov.
- Infrakingdom Chordonia Haeckel, 1874 em. Hatschek, 1888 stat. nov.
- Infrakingdom Coelomopora Marcus, 1958 stat. nov.
- Infrakingdom Cormophyta Endlicher, 1836 stat. nov.
- Infrakingdom Posibacteria Cavalier-Smith, 1987 stat. nov.
- Infrakingdom Sarcomastigota Cavalier-Smith, 1983 stat. nov. em.
- Superphylum Eobacteria Cavalier-Smith, 1982 stat. nov.
- Superphylum Pimelobacteria Cavalier-Smith, 1992 stat. nov.
- Superphylum Polyzoa Thompson, 1830 stat. nov. em.
- Phylum Amoebozoa Lühe, 1913 stat. nov. em.
- Phylum Ascomycota Berkeley, 1857 stat. nov.
- Phylum Spirochaetae Ehrenberg, 1855 stat. nov.
- Subphylum Anthocerotae auct. stat. nov.
- Subphylum Anthozoa Ehrenberg, 1831 stat. nov.
- Subphylum Appendicularia Lahille, 1890 stat. nov.
- Subphylum Calcispongiae Blainville, 1834 stat. nov.
- Subphylum Choanozoa Cavalier-Smith, 1981 em. 1983 stat. nov.
- Subphylum Cycliophora Funch & Kristensen, 1995 stat. nov.
- Subphylum Echiura Sedgwick, 1898 orth. em. Stephen, 1965 stat. nov.
- Subphylum Enteropneusta Gegenbaur, 1870 stat. nov.
- Subphylum Euryarcheota Woese, Kandler [[& Wheelis, 1990 stat. nov.
- Subphylum Glossophora Lankester, 1889 stat. nov.
- Subphylum Gregarinae Haeckel, 1866 stat. nov.
- Subphylum Gymnolaemata Allman, 1856 stat. nov.
- Subphylum Hepaticae auct. stat. nov.
- Subphylum Hyalospongiae Vosmaer, 1886 stat. nov. em.
- Subphylum Musci Linnaeus, 1753 stat. nov.
- Subphylum Nematoida Rudolphi, 1808 orth. em. stat. nov.
- Subphylum Neodermata Ehlers, 1985 stat. nov.
- Subphylum Pogonophora Johannson, 1937 stat. nov.
- Subphylum Pteridophytina Eichler, 1883 stat. nov.
- Subphylum Pterobranchia Lankester, 1878 stat. nov.
- Subphylum Rhodobacteria Cavalier-Smith, 1987 stat. nov.
- Subphylum Selenobacteria Cavalier-Smith, 1992 stat. nov.
- Subphylum Spermatophytina auct. stat. nov.
- Subphylum Sulfobacteria Cavalier-Smith, 1986 stat. nov.
- Subphylum Tardigrada Doyère, 1840 stat. nov.
- Subphylum Togobacteria Cavalier-Smith, 1992 stat. nov.
- Subphylum †Trilobitomorpha Størmer, 1944 stat. nov.
- Infraphylum Acanthocephala Rudolphi, 1809 stat. nov.
- Infraphylum Actinobacteria Margulis, 1974 stat. nov.
- Infraphylum Alphabacteria Cavalier-Smith, 1992 stat. nov.
- Infraphylum Archamoebae Cavalier-Smith, 1983 stat. nov.
- Infraphylum Cercomeromorpha Bychowsky, 1937 stat. nov.
- Infraphylum Charophytae Engler, 1887 stat. nov.
- Infraphylum †Conodonta Eichenberg, 1930 stat. nov.
- Infraphylum Filices Linnaeus, 1753 stat. nov.
- Infraphylum Lycophytae auct. stat. nov.
- Infraphylum Mycetozoa De]] Bary, 1859 stat. nov.
- Infraphylum Nematoda Gegenbaur, 1859 orthog. em. stat. nov.
- Infraphylum Nematomorpha Vejovsky, 1886 stat. nov.
- Infraphylum Rhabditophora Ehlers, 1985 stat. nov.
- Infraphylum Rotifera Cuvier, 1798 stat. nov.
- Infraphylum Sphagneae auct. stat. nov.
- Infraphylum Sphenophytae auct. stat. nov.
- Infraphylum Trematoda Rudolphi, 1808 stat. nov.
- Infraphylum Univalvia Linnaeus, 1758 stat. nov. em.
- Superclass Ascetospora Sprague, 1979 stat. nov.
- Superclass Dictyostelia Lister, 1909 stat. nov.
- Superclass Diplonemia Cavalier-Smith, 1993 stat. nov.
- Superclass Eumyxa Cavalier-Smith, 1993 stat. nov.
- Superclass Hematozoa Vivier, 1982 stat. nov.
- Superclass Hemibasidiomycetia Engler, 1897 stat. nov.
- Superclass Hymenomycetia Fries, 1821 stat. nov. et em.
- Subclass Clavomycetidae Fries, 1821 stat. nov.
- Subclass Mucoromycetidae Fries, 1832 stat. nov.
- Subclass Pileomycetidae Fries, 1821 stat. nov.
- Subclass Saccharomycetidae de]] Bary, 1866 stat. nov.
- Subclass Sporidiomycetidae Moore, 1980 stat. nov.
- Subclass Uredomycetidae Brogniart, 1824 stat. nov.
[edit] New position
- Superphylum Endoflagellata Cavalier-Smith, 1992
- Phylum Annelida Lamarck, 1809
- Phylum Arthropoda von Siebold & Stannius, 1848
- Phylum Basidiomycota de]] Bary, 1866 em. auct. stat. nov. Moore, 1980
- Phylum Bryophyta Braun, 1864 em. Eichler, 1883
- Phylum Bryozoa Ehrenberg, 1831
- Phylum Chaetognatha Hyman, 1959
- Phylum Chordata Bateson, 1885 em.
- Phylum Cyanobacteria Stanier, 1973
- Phylum Echinodermata De]] Brugière, 1789
- Phylum Euglenozoa Cavalier-Smith, 1981
- Phylum Foraminifera (D'Orbigny, 1826) Eichwald, 1830 stat. nov. Margulis, 1974
- Phylum Glaucophyta Skuja, 1954
- Phylum Hadobacteria Cavalier-Smith, 1992 em.
- Phylum Heliobacteria Cavalier-Smith, 1987
- Phylum Hemichordata Bateson, 1885 stat. nov. orthog. em. auct.
- Phylum Mendosicutes Gibbons & Murray, 1978
- Phylum Mesozoa van Beneden, 1877
- Phylum Microsporidia Balbiani, 1882 stat. nov. Weiser, 1977
- Phylum Mollusca Linnaeus, 1758 em. Lamarck
- Phylum Nemathelminthes Gegenbaur, 1859 em.
- Phylum Nemertina Oersted, 1844 em. Schultze, 1850
- Phylum Neomonada Cavalier-Smith, 1997
- Phylum Ochrophyta Cavalier-Smith, 1986 stat. nov. 1995
- Phylum Percolozoa Cavalier-Smith, 1991
- Phylum Placozoa Grell, 1971
- Phylum Planctobacteria Cavalier-Smith, 1987
- Phylum Platyhelminthes Gegenbaur, 1859 em. Minot, 1876
- Phylum Posibacteria Cavalier-Smith, 1987
- Phylum Rhodophyta Wettstein, 1922
- Phylum Sagenista Cavalier-Smith, 1995
- Phylum Sipuncula Raffinesque, 1814 stat. nov. Sedgwick, 1898
- Phylum Sphingobacteria Cavalier-Smith, 1987
- Phylum Urochorda Lankester, 1877
- Subphylum Brachiopoda Duméril, 1806
- Subphylum Euascomycotina Engler, 1897 stat. nov. Ainsworth, 1966
- Subphylum Hemiascomycotina Brefeldt, 1891 stat. nov. Ainsworth, 1966
- Subphylum Lobosa Carpenter, 1861 stat. nov. Cavalier-Smith, 1997 em.
- Subphylum Monadofilosa Cavalier-Smith, 1997
- Subphylum Onychophora Grube, 1853
- Subphylum Opalinata Wenyon, 1926 stat. nov. em. Cavalier-Smith, 1993, 1997
- Subphylum Phoronida Hatschek, 1888
- Subphylum Phytomyxa Cavalier-Smith, 1997
- Subphylum Pseudofungi Cavalier-Smith, 1986 em. 1989
- Subphylum Reticulofilosa Cavalier-Smith, 1997
- Infraphylum Angiospermae auct.
- Infraphylum Gymnospermae auct.
- Infraphylum Halomebacteria Cavalier-Smith, 1986
- Infraphylum Kinorhyncha Reinhard, 1887
- Superclass Euglenoida Bütschli, 1884 stat. nov. Cavalier-Smith, 1997
- Class Athalamea
- Class Bangiophyceae em.
- Class Charophyceae sensu stricto
- Class Chytridiomycetes De Bary, 1863 stat. nov. Sparrow, 1958 em. Cavalier-Smith, 1981
- Class Clostridea Cavalier-Smith, 1982
- Class Conjugophyceae auct.
- Class Cristidiscoidea
- Class Florideophyceae
- Class Gastrotricha
- Class Gnathostomulida
- Class Homobasidiomycetes Patouillard, 1900
- Class Ichthyosporea
[edit] Published papers
The following list of references is from The Taxonomicon's page on T. Cavalier-Smith.
[edit] Articles
- Cavalier-Smith, T. 1981. Eukaryotic kingdoms, seven or nine? BioSystems 14: 461-481. - an early paper, on Eukarya as a whole
- Cavalier-Smith, T. 1986. The kingdom Chromista: origin and systematics. Progress in Phycological Research 4: 309-347.
- Cavalier-Smith, T., Allsopp, M.T.E.P. & Chao, E.E. 1994. Chimeric conundra: Are nucleomorphs and chromists monophyletic or polyphyletic? Proc. Natl. Acad. Sci. USA 91: 11368-11372. [Nov 1994] [Online]
- Cavalier-Smith, T. 1998. A revised six-kingdom system of life. Biol. Rev. 73: 203-266. - an important paper that names many new taxa
- Cavalier-Smith, T. 2002a. The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification. International Journal of Systematic and Evolutionary Microbiology 52: 7-76. [14 Jan 2002] [Online]
- Cavalier-Smith, T. 2002b. The phagotrophic origin of eukaryotes and phylogenetic classification of Protozoa. International Journal of Systematic and Evolutionary Microbiology 52: 297-354. [Online]
- Cavalier-Smith, T. & Chao, E.E.-Y. 2003. Phylogeny and classification of phylum Cercozoa (Protozoa). Protist 154(3-4): 341-358. [Oct 2003]
- Cavalier-Smith, T. & Chao, E.E.-Y. 2003. Phylogeny of Choanozoa, Apusozoa, and Other Protozoa and Early Eukaryote Megaevolution. J. Mol. Evol. 56: 540-563.
- Cavalier-Smith, T. 2003. The excavate protozoan phyla Metamonada Grassé emend. (Anaeromonadea, Parabasalia, Carpediemonas, Eopharyngia) and Loukozoa emend. (Jakobea, Malawimonas: their evolutionary affinities and new higher taxa. International Journal of Systematic and Evolutionary Microbiology 53: 1741-1758.
- Cavalier-Smith, T., Chao, E.E.-Y. & Oates, B. 2004. Molecular phylogeny of Amoebozoa and the evolutionary significance of the unikont Phalansterium. European Journal of Protistology 40: 21-48. [Online]
- Bass, D. & Cavalier-Smith, T. 2004. Phylum-specific environmental DNA analysis reveals remarkably high global biodiversity of Cercozoa (Protozoa). Int. J. Syst. Evol. Microbiol. 54: 2393-2404.
- Cavalier-Smith, T. & Chao, E.E. 2004. Protalveolate phylogeny and the origins of Sporozoa and dinoflagellates (phylum Myzozoa nom. nov.). European Journal of Protistology 40: 21-48.
- Cavalier-Smith, T. 2004. Only six kingdoms of life. Proc. R. Soc. Lond. B 271: 1251-1262. Online - summary/overview of this taxonomy and phylogeny
- Kudryavtsev, A., Bernhard, D., Schlegel, M., Chao, E.E.-Y. & Cavalier-Smith, T. 2005. 18S Ribosomal RNA Gene Sequences of Cochliopodium (Himatismenida) and the Phylogeny of Amoebozoa. Protist 156(2): 215-224. [Aug 2005]
[edit] Chapters
- Cavalier-Smith, T. 2000. Flagellate megaevolution: the basis for eukaryote diversification. In Green, J.R. & Leadbeater, B.S.C. (eds.) The Flagellates, Taylor & Francis, London: 361-390.
[edit] Credits
Wikipedia, The Taxonomicon, this page MAK061016
