Togobacteria
From Palaeos.org
<==Togobacteria | i. s.: Thermoanaerovibrio C-S02 | Carboxydobrachium C-S02 | Megamonas hypermegas [=Bacteroides hypermegas] LHA02 |--Thermotogaceae [Thermotogae, Thermotogales] C-S02 | |--Thermotoga Stetter & Huber 1986VP R01 | | | i. s.: T. neapolitana Jannasch, Huber et al. 1989VP R01 | | | T. thermarum Windberger, Huber & Stetter 1992VP R01 | | |--*T. maritima Stetter & Huber 1986VP R01 | | `--+--T. elfii Ravot, Magot et al. 1995VP R01 | | `--T. hypogea Fardeau, Ollivier et al. 1997VP R01 | `--+--Thermosipho Huber, Woese et al. 1989VP R01 | | |--*T. africanus Huber, Woese et al. 1989VP R01 | | |--T. japonicus MK03 | | `--T. melanesiensis Antoine, Cilia et al. 1997VP R01 | `--+--+--Thermopallium natronophilum R01 | | `--Fervidobacterium Patel, Morgan & Daniel 1985VP R01 | | | i. s.: F. pennivorans Friedrich & Antranikian 1999VP [=F. pennavorans] R01 | | |--*F. nodosum Patel, Morgan & Daniel 1985VP R01 | | `--+--F. gondwanense Andrews & Patel 1996VP R01 | | `--F. islandicum Huber, Woese et al. 1991VP R01 | `--+--Petrotoga Davey, Wood et al. 1993VP R01 | | |--*P. miotherma Davey, Wood et al. 1993VP R01 | | `--P. mobilis Lien, Madsen et al. 1998VP R01 | `--Geotoga Davey, Wood et al. 1993VP R01 | |--*G. petraea Davey, Wood et al. 1993VP R01 | `--G. subterranea Davey, Wood et al. 1993VP R01 `--+--Heliobacteriaceae [Heliobacteria, Heliobacteriales] C-S02 | |--+--Heliophilum Ormerod, Kimble et al. 1996VP M01 | | | `--*H. fasciatum Ormerod, Kimble et al. 1996VP M01 | | `--Heliorestis Bryantseva, Gorlenko et al. 2000VP M01 | | `--*H. daurensis Bryantseva, Gorlenko et al. 2000VP M01 | `--Heliobacterium Gest & Favinger 1985VP M01 | | i. s.: H. undosum Bryantseva et al. 2001 JC08 | |--H. modesticaldum Kimble, Mandelco et al. 1996VP M01 | `--+--H. gestii Ormerod, Kimble et al. 1996VP M01 | `--+--*H. chlorum Gest & Favinger 1985VP M01 | `--Heliobacillus Beer-Romero & Gest 1998VP M01 | `--*H. mobilis Beer-Romero & Gest 1998VP M01 `--+--Selenobacteria C-S98 | |--+--‘Clostridium’ quercicolum LHA02 | | `--Sporomusa PHK96 | | |--S. paucivorans LHA02 | | |--S. silvacetica PK03 | | `--S. termitida LHA02 | `--+--+--‘Selenomonas’ sputigena LHA02 | | `--Zymophilus paucivorans LHA02 | `--+--Pectinatus LHA02 | | |--P. cerevisiiphilus LHA02 | | `--P. frisingensis LHA02 | `--Selenomonas LHA02 | |--S. lactifex LHA02 | `--+--S. ruminantium LHA02 | | |--S. r. ssp. ruminantium LHA02 | | `--S. r. ssp. lactilytica LHA02 | `--Mitsuokella Shah & Collins 1982 LHA02 | |--M. jalaludinii Lan, Ho & Abdullah 2002 LHA02 | `--M. multacida (Mitsuoka et al.) Shah & Collins 1982 (see below for synonymy) LHA02 `--+--Acidaminococcaceae DMW03 | | i. s.: Acetonema GH01a | | Anaeromusa GH01a | | Quinella ovalis GH01a, GH01b | | Schwartzia GH01a | | Succiniclasticum GH01a | |--+--Acidaminococcus fermentans LHA02 | | `--Phascolarctobacterium faecium LHA02 | `--Dialister (ex Bergey et al. 1923) Moore & Moore 1994 DMW03 | |--*D. pneumosintes (Olitsky & Gates) Moore & Moore 1994 (see below for synonymy) DMW03 | `--D. invisus Downes, Munson & Wade 2003 DMW03 `--Veillonellaceae PHK96 |--+--Anaeroglobus geminatus DMW03 | `--Megasphaera DMW03 | |--M. micronuciformis DMW03 | `--+--M. cerevisiae DMW03 | `--M. elsdenii DMW03 `--Veillonella DMW03 | i. s.: V. alcalescens PHK96 |--+--V. criceti DMW03 | `--V. ratti DMW03 `--+--V. atypica DMW03 `--+--V. dispar DMW03 `--V. parvula DMW03
Nomina invalida: Heliobacterium sulfidophilum Bryantseva et al. 2001 JC08
Heliorestis baculata Bryantseva et al. 2001 JC08
Thermotoga subterranea Jeanthon, Reysenbach et al. 1995 R01
*Dialister pneumosintes (Olitsky & Gates) Moore & Moore 1994 [=Bacterium pneumosintes Olitsky & Gates 1921, Bacteroides pneumosintes] DMW03
Mitsuokella multacida (Mitsuoka et al.) Shah & Collins 1982 [=Bacteroides multiacidus Mitsuoka et al. 1974, M. multiacidus] LHA02
* Type species of generic name indicated
References
[C-S98] Cavalier-Smith, T. 1998. A revised six-kingdom system of life. Biological Reviews 73: 203-266.
[C-S02] Cavalier-Smith, T. 2002. The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification. International Journal of Systematic and Evolutionary Microbiology 52: 7-76.
[DMW03] Downes, J., M. Munson & W. G. Wade. 2003. Dialister invisus sp. nov., isolated from the human oral cavity. International Journal of Systematic and Evolutionary Microbiology 53: 1937-1940.
[GH01a] Garrity, G. M., & J. G. Holt. 2001a. The road map to the Manual. In Bergey’s Manual of Systematic Bacteriology, 2nd ed., vol. 1. The Archaea and the Deeply Branching and Phototrophic Bacteria (Boone, D. R., R. W. Castenholz & G. M. Garrity, eds) pp. 119-166. Springer.
[GH01b] Garrity, G. M., & J. G. Holt. 2001b. Phylum BIX. Deferribacteres phy. nov. In Bergey’s Manual of Systematic Bacteriology, 2nd ed., vol. 1. The Archaea and the Deeply Branching and Phototrophic Bacteria (Boone, D. R., R. W. Castenholz & G. M. Garrity, eds) pp. 465-471. Springer.
[JC08] Judicial Commission of the International Committee on Systematics of Prokaryotes. 2008. Status of strains that contravene Rules 27 (3) and 30 of the International Code of Nomenclature of Bacteria. Opinion 81. International Journal of Systematic and Evolutionary Microbiology 58: 1755-1763.
[LHA02] Lan, G. Q., Y. W. Ho & N. Abdullah. 2002. Mitsuokella jalaludinii sp. nov., from the rumens of cattle in Malaysia. International Journal of Systematic and Evolutionary Microbiology 52: 713-718.
[M01] Madigan, M. T. 2001. Family VI. “Heliobacteriaceae” Beer-Romero and Gest, 1987, 113. In Bergey’s Manual of Systematic Bacteriology, 2nd ed., vol. 1. The Archaea and the Deeply Branching and Phototrophic Bacteria (Boone, D. R., R. W. Castenholz & G. M. Garrity, eds) pp. 625-630. Springer.
[MK03] Miroshnichenko, M. L., N. A. Kostrikina, N. A. Chernyh, N. V. Pimenov, T. P. Tourova, A. N. Antipov, S. Spring, E. Stackebrandt & E. A. Bonch-Osmolovskaya. 2003. Caldithrix abyssi gen. nov., sp. nov., a nitrate-reducing, thermophilic, anaerobic bacterium isolated from a Mid-Atlantic Ridge hydrothermal vent, represents a novel bacterial lineage. International Journal of Systematic and Evolutionary Microbiology 53: 323-329.
[PK03] Parshina, S. N., R. Kleerebezem, J. L. Sanz, G. Lettinga, A. N. Nozhevnikova, N. A. Kostrikina, A. M. Lysenko & A. J. M. Stams. 2003. Soehningia saccharolytica gen. nov., sp. nov. and Clostridium amygdalinum sp. nov., two novel anaerobic, benzaldehyde-converting bacteria. International Journal of Systematic and Evolutionary Microbiology 53: 1791-1799.
[PHK96] Prescott, L. M., J. P. Harley & D. A. Klein. 1996. Microbiology (3rd ed.) Wm. C. Brown Publishers: Dubuque (Iowa).
[R01] Reysenbach, A.-L. 2001. Phylum BII. Thermotogae phy. nov. In Bergey’s Manual of Systematic Bacteriology, 2nd ed., vol. 1. The Archaea and the Deeply Branching and Phototrophic Bacteria (Boone, D. R., R. W. Castenholz & G. M. Garrity, eds) pp. 369-387. Springer.
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Christopher 11:51, 2 November 2010 (UTC)
